Sample ERS013834 Download

Titleno content
Anonymized nameno content
Scientific namemarine metagenome
Common namemarine metagenome
Descriptionmarine biome, fjord, coastal water, sample ws_149
Referencesno content
Organismmarine metagenome
Cell typeERS013834
SubmitterNEBC
Related objects
SubmissionsERA011741
LinksUnknown DB(biosample)
alkalinity 2152.6 micromol per kilogram
amount or size of sample collected 0.75 liters
assembly NAST Alignment Tool
chimera check Mallard 1.02
chlorophyll 2.6 micrograms per liter
collection date 20/05/2006
ENA-CHECKLIST GSC:MIMARKS:2.1
ENA-KEYWORD GSC, MIxS, MIMARKS
ENA-STANDARD GSC:MIENS_S:2.1:compliant
environment marine biome, fjord, coastal water
experimental factor carbon dioxide
geographic location (altitude/elevation) 0 meters
geographic location (country) Norway:Raunefjord
geographic location (depth) 0 meters
geographic location (latitude and longitude) +60.27, +5.22
investigation type MIMARKS-survey
Library construction method paired-end
library vector pCR4-TOPO (InVitrogen)
nucleic acid extraction http://nebc.nerc.ac.uk/nebcfs/public/Joint/protocols/Oxford_Sample_processing_and_NA_extraction.pdf
pH 8.29
project name Bergen Mesocosm May 2006
relevant standard operating procedures http://www.nerc.ac.uk/about/work/policy/safety/procedures.asp
salinity 31.4 practical salinity units
sample collection device or method Bucket on a string
sample material processing Whatman GF/A pre-filtration
sequence quality check none
sequencing method Sanger
substrate salt water