Sample ERS013827 Download

Titleno content
Anonymized nameno content
Scientific namemarine metagenome
Common namemarine metagenome
Descriptionmarine biome, fjord, coastal water, sample ws_96
Referencesno content
Organismmarine metagenome
Cell typeERS013827
SubmitterNEBC
Related objects
SubmissionsERA011741
LinksUnknown DB(biosample)
alkalinity 2188.9 micromol per kilogram
amount or size of sample collected 2 liter
assembly NAST Alignment Tool
chimera check Mallard 1.02
chlorophyll 14.48 micrograms per liter
collection date 13/05/2006
ENA-CHECKLIST GSC:MIMARKS:2.1
ENA-KEYWORD GSC, MIxS, MIMARKS
ENA-STANDARD GSC:MIENS_S:2.1:compliant
environment marine biome, fjord, coastal water
experimental factor carbon dioxide
geographic location (altitude/elevation) 0 meters
geographic location (country) Norway:Raunefjord
geographic location (depth) 0 meters
geographic location (latitude and longitude) +60.27, +5.22
investigation type MIMARKS-survey
Library construction method paired-end
library vector pCR4-TOPO (InVitrogen)
nucleic acid extraction http://nebc.nerc.ac.uk/nebcfs/public/Joint/protocols/Oxford_Sample_processing_and_NA_extraction.pdf
pH 8.01
project name Bergen Mesocosm May 2006
relevant standard operating procedures http://www.nerc.ac.uk/about/work/policy/safety/procedures.asp
salinity 31.4 practical salinity units
sample collection device or method Bucket on a string
sample material processing Whatman GF/A pre-filtration
sequence quality check none
sequencing method Sanger
substrate salt water