This is an alternate search and browse interface for the complete SRA database:

  • Search for "typical" NGS queries like organism, author, submitter, disease, study type, key words, etc.
  • Identify any study, experiment, sample, or run of interest
  • Search results displayed in a ranked list with relevant meta data
  • Download data in SRA format for analysis in your tool of choice

DNAnexus is delighted that the NCBI is continuing to support the Sequence Read Archive, following concerns that the SRA may be phased out due to funding constraints. We continue to provide our search and browsing interface for the SRA, but data downloads will come directly from the NCBI. Downloading SRA file format data through DNAnexus will continue to be possible, however the ability to download FASTQ files or directly import the data into DNAnexus will no longer be available

The Sequence Read Archive (SRA) stores raw sequencing data from next generation platforms including Applied Biostystems SOLID® System, Complete Genomics®, Helicos Heliscope®, Illumina Genome Analyzer®, Pacific Biosciences SMRT® and Roche 454 GS System®. The SRA is the single best resource for useful data from initiatives such as the 1,000 Genomes Project and institutions like the Broad Institute, Washington University, and the Wellcome Trust Sanger Institute

Last updated: Jun 27 2014